A web-based three-dimensional protein retrieval system by matching visual similarity
نویسندگان
چکیده
SUMMARY A web-based three-dimensional (3D) protein retrieval system is available for protein structure data including all PDB and FSSP dataset. In this system, we use a visual-based matching method to compare the protein structure from multiple viewpoints. It takes less than three seconds for each query with 90% accuracy on an average.
منابع مشابه
Retrieval of 3D protein structures
A protein molecule is made of a long chain of amino acid sequences that fold into a complex three-dimensional structure. It is often the geometrical shapes that determine the protein functions. In molecular biology, researchers use sequence alignment and structure matching to compare the similarity among proteins. Considering proteins as 3D structures, we propose a novel algorithm to identify g...
متن کاملA procedure for Web Service Selection Using WS-Policy Semantic Matching
In general, Policy-based approaches play an important role in the management of web services, for instance, in the choice of semantic web service and quality of services (QoS) in particular. The present research work illustrates a procedure for the web service selection among functionality similar web services based on WS-Policy semantic matching. In this study, the procedure of WS-Policy publi...
متن کاملDynamic Visualization of Hubs and Authorities During Web Search
The Information Retrieval Visualizer (IRV) is a web-based retrieval system that provides the user with dynamic visualizations of search results. It combines well-known techniques of information retrieval, including stemming, keyword matching, and cosine similarity, with the new and relatively successful hubs and authority approach for describing Web document relevance based on a document’s rela...
متن کاملImproved Skips for Faster Postings List Intersection
Information retrieval can be achieved through computerized processes by generating a list of relevant responses to a query. The document processor, matching function and query analyzer are the main components of an information retrieval system. Document retrieval system is fundamentally based on: Boolean, vector-space, probabilistic, and language models. In this paper, a new methodology for mat...
متن کاملImproved Skips for Faster Postings List Intersection
Information retrieval can be achieved through computerized processes by generating a list of relevant responses to a query. The document processor, matching function and query analyzer are the main components of an information retrieval system. Document retrieval system is fundamentally based on: Boolean, vector-space, probabilistic, and language models. In this paper, a new methodology for mat...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
برای دانلود متن کامل این مقاله و بیش از 32 میلیون مقاله دیگر ابتدا ثبت نام کنید
ثبت ناماگر عضو سایت هستید لطفا وارد حساب کاربری خود شوید
ورودعنوان ژورنال:
- Bioinformatics
دوره 21 13 شماره
صفحات -
تاریخ انتشار 2005